Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Gm12428-201ENSMUST00000119844 727 ntBASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Gm3436-201ENSMUST00000179930 840 ntBASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Gm7775-201ENSMUST00000218871 853 ntBASIC13.16□□□□□ -0.3
Vmp1Q99KU0 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vmp1Q99KU0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Gm9229-201ENSMUST00000222777 126 ntBASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.15□□□□□ -0.3
Vmp1Q99KU0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vmp1Q99KU0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vmp1Q99KU0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms