Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rfc4Q99J62 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rfc4Q99J62 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rfc4Q99J62 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rfc4Q99J62 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rfc4Q99J62 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.63■□□□□ 0.09
Rfc4Q99J62 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Gm26927-201ENSMUST00000182385 965 ntBASIC15.63■□□□□ 0.09
Rfc4Q99J62 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Gm37922-201ENSMUST00000195596 455 ntBASIC15.63■□□□□ 0.09
Rfc4Q99J62 Gm37497-201ENSMUST00000195830 798 ntBASIC15.63■□□□□ 0.09
Rfc4Q99J62 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Gm24526-201ENSMUST00000082921 158 ntBASIC15.63■□□□□ 0.09
Rfc4Q99J62 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rfc4Q99J62 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.62■□□□□ 0.09
Rfc4Q99J62 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Gm4857-201ENSMUST00000192718 785 ntBASIC15.62■□□□□ 0.09
Rfc4Q99J62 Gm43133-201ENSMUST00000197472 463 ntBASIC15.62■□□□□ 0.09
Rfc4Q99J62 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.62■□□□□ 0.09
Rfc4Q99J62 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Gm18935-201ENSMUST00000212692 664 ntBASIC15.62■□□□□ 0.09
Rfc4Q99J62 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.62■□□□□ 0.09
Rfc4Q99J62 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.62■□□□□ 0.09
Rfc4Q99J62 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfc4Q99J62 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Gm15236-201ENSMUST00000117309 379 ntBASIC15.61■□□□□ 0.09
Rfc4Q99J62 Mir3102-201ENSMUST00000175555 104 ntBASIC15.61■□□□□ 0.09
Rfc4Q99J62 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.61■□□□□ 0.09
Rfc4Q99J62 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Gm16372-201ENSMUST00000073088 450 ntBASIC15.61■□□□□ 0.09
Rfc4Q99J62 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfc4Q99J62 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms