Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.72■□□□□ 0.11
Smc1bQ920F6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.72■□□□□ 0.11
Smc1bQ920F6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc1bQ920F6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
Smc1bQ920F6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.71■□□□□ 0.11
Smc1bQ920F6 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.71■□□□□ 0.11
Smc1bQ920F6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Gm8652-201ENSMUST00000181363 964 ntBASIC15.71■□□□□ 0.11
Smc1bQ920F6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Gm6091-201ENSMUST00000098307 165 ntBASIC15.71■□□□□ 0.11
Smc1bQ920F6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smc1bQ920F6 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.71■□□□□ 0.11
Smc1bQ920F6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.71■□□□□ 0.1
Smc1bQ920F6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smc1bQ920F6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.71■□□□□ 0.1
Smc1bQ920F6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smc1bQ920F6 Rubie-203ENSMUST00000227803 2430 ntBASIC15.7■□□□□ 0.1
Smc1bQ920F6 Acot6-202ENSMUST00000222921 3622 ntBASIC15.7■□□□□ 0.1
Smc1bQ920F6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.7■□□□□ 0.1
Smc1bQ920F6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.7■□□□□ 0.1
Smc1bQ920F6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.7■□□□□ 0.1
Smc1bQ920F6 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.7■□□□□ 0.1
Smc1bQ920F6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Smc1bQ920F6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Mir3102-201ENSMUST00000175555 104 ntBASIC15.69■□□□□ 0.1
Smc1bQ920F6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Gm27572-201ENSMUST00000183702 255 ntBASIC15.69■□□□□ 0.1
Smc1bQ920F6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.69■□□□□ 0.1
Smc1bQ920F6 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.69■□□□□ 0.1
Smc1bQ920F6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms