Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb6Q91XZ4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gm14057-201ENSMUST00000120631 482 ntBASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gm42612-201ENSMUST00000197986 623 ntBASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gm43170-201ENSMUST00000199827 612 ntBASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb6Q91XZ4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Gm15678-201ENSMUST00000117573 960 ntBASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Gm11524-201ENSMUST00000119349 807 ntBASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Gm12485-201ENSMUST00000119641 291 ntBASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Gm15376-201ENSMUST00000122258 783 ntBASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Auts2-212ENSMUST00000178555 309 ntBASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb6Q91XZ4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb6Q91XZ4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb6Q91XZ4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms