Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhga11Q91XY8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhga11Q91XY8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhga11Q91XY8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhga11Q91XY8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhga11Q91XY8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Pcdhga11Q91XY8 Paupar-201ENSMUST00000194826 3482 ntBASIC13.21□□□□□ -0.3
Pcdhga11Q91XY8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Gm15460-201ENSMUST00000118147 391 ntBASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Mir1897-201ENSMUST00000122581 272 ntBASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Gm27533-201ENSMUST00000183800 152 ntBASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Gm9229-201ENSMUST00000222777 126 ntBASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Shd-206ENSMUST00000225145 998 ntBASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdhga11Q91XY8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Gm4804-201ENSMUST00000182234 999 ntBASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Gm21470-201ENSMUST00000187680 696 ntBASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga11Q91XY8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms