Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.53■□□□□ 0.08
Trex1Q91XB0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Gm13123-201ENSMUST00000122173 492 ntBASIC15.53■□□□□ 0.08
Trex1Q91XB0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Gm26927-201ENSMUST00000182385 965 ntBASIC15.53■□□□□ 0.08
Trex1Q91XB0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.53■□□□□ 0.08
Trex1Q91XB0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.53■□□□□ 0.08
Trex1Q91XB0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trex1Q91XB0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trex1Q91XB0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Mir686-201ENSMUST00000102174 109 ntBASIC15.52■□□□□ 0.08
Trex1Q91XB0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trex1Q91XB0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.52■□□□□ 0.08
Trex1Q91XB0 Snora73a-201ENSMUST00000082453 205 ntBASIC15.52■□□□□ 0.08
Trex1Q91XB0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trex1Q91XB0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trex1Q91XB0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.52■□□□□ 0.07
Trex1Q91XB0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trex1Q91XB0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Trex1Q91XB0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.51■□□□□ 0.07
Trex1Q91XB0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.51■□□□□ 0.07
Trex1Q91XB0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trex1Q91XB0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.5■□□□□ 0.07
Trex1Q91XB0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms