Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Gm12585-201ENSMUST00000117307 290 ntBASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Gm13453-201ENSMUST00000118708 357 ntBASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H1fooQ8VIK3 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Gm13385-201ENSMUST00000121089 220 ntBASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Gm27680-201ENSMUST00000184192 160 ntBASIC11.41□□□□□ -0.58
H1fooQ8VIK3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Gm10766-202ENSMUST00000194123 606 ntBASIC11.41□□□□□ -0.58
H1fooQ8VIK3 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
H1fooQ8VIK3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Gm43703-201ENSMUST00000200523 763 ntBASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Gm5425-201ENSMUST00000214125 459 ntBASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
H1fooQ8VIK3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms