Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim60Q8VI40 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim60Q8VI40 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim60Q8VI40 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim60Q8VI40 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim60Q8VI40 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.08□□□□□ -0.16
Trim60Q8VI40 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Gm4995-201ENSMUST00000117247 432 ntBASIC14.08□□□□□ -0.16
Trim60Q8VI40 Gm15393-201ENSMUST00000120499 219 ntBASIC14.08□□□□□ -0.16
Trim60Q8VI40 Mir1897-201ENSMUST00000122581 272 ntBASIC14.08□□□□□ -0.16
Trim60Q8VI40 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Gm27702-201ENSMUST00000184512 56 ntBASIC14.08□□□□□ -0.16
Trim60Q8VI40 Gm28630-201ENSMUST00000187806 498 ntBASIC14.08□□□□□ -0.16
Trim60Q8VI40 Gm7774-201ENSMUST00000200064 533 ntBASIC14.08□□□□□ -0.16
Trim60Q8VI40 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim60Q8VI40 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim60Q8VI40 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.07□□□□□ -0.16
Trim60Q8VI40 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Gm6415-201ENSMUST00000118488 348 ntBASIC14.07□□□□□ -0.16
Trim60Q8VI40 Gm15693-201ENSMUST00000120470 637 ntBASIC14.07□□□□□ -0.16
Trim60Q8VI40 Gm13385-201ENSMUST00000121089 220 ntBASIC14.07□□□□□ -0.16
Trim60Q8VI40 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Gm24513-201ENSMUST00000174964 138 ntBASIC14.07□□□□□ -0.16
Trim60Q8VI40 Gm24420-201ENSMUST00000176676 59 ntBASIC14.07□□□□□ -0.16
Trim60Q8VI40 Gm27397-201ENSMUST00000184997 107 ntBASIC14.07□□□□□ -0.16
Trim60Q8VI40 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim60Q8VI40 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.07□□□□□ -0.16
Trim60Q8VI40 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.07□□□□□ -0.16
Trim60Q8VI40 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim60Q8VI40 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim60Q8VI40 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms