Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Gm14494-201ENSMUST00000118786 435 ntBASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Gm18737-201ENSMUST00000173594 937 ntBASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Gm20553-201ENSMUST00000204205 844 ntBASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh18Q8VHR0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh18Q8VHR0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.31
Pcdh18Q8VHR0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh18Q8VHR0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh18Q8VHR0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh18Q8VHR0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms