Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Gm6443-201ENSMUST00000203599 874 ntBASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Psmb5-202ENSMUST00000227257 622 ntBASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Gm14140-201ENSMUST00000119999 995 ntBASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Rpa1Q8VEE4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Rpa1Q8VEE4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rpa1Q8VEE4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.71□□□□□ -0.22
Rpa1Q8VEE4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rpa1Q8VEE4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rpa1Q8VEE4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rpa1Q8VEE4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rpa1Q8VEE4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rpa1Q8VEE4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rpa1Q8VEE4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rpa1Q8VEE4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Rpa1Q8VEE4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gm29741-201ENSMUST00000192667 421 ntBASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gm17968-201ENSMUST00000194902 784 ntBASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gm18206-201ENSMUST00000207027 926 ntBASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms