Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.87□□□□□ -0.35
Ndc1Q8VCB1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Gm29741-201ENSMUST00000192667 421 ntBASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.86□□□□□ -0.35
Ndc1Q8VCB1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Gm11524-201ENSMUST00000119349 807 ntBASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ndc1Q8VCB1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms