Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.08□□□□□ -0.31
Lsm1Q8VC85 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm1Q8VC85 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Gm12585-201ENSMUST00000117307 290 ntBASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lsm1Q8VC85 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.06□□□□□ -0.32
Lsm1Q8VC85 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Gm25948-201ENSMUST00000175334 112 ntBASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Gm27702-201ENSMUST00000184512 56 ntBASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Gm43703-201ENSMUST00000200523 763 ntBASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms