Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Gm15321-201ENSMUST00000121290 288 ntBASIC12.85□□□□□ -0.35
Clrn1Q8K445 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.85□□□□□ -0.35
Clrn1Q8K445 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.85□□□□□ -0.35
Clrn1Q8K445 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.85□□□□□ -0.35
Clrn1Q8K445 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.85□□□□□ -0.35
Clrn1Q8K445 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn1Q8K445 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Gm28760-201ENSMUST00000185995 736 ntBASIC12.84□□□□□ -0.35
Clrn1Q8K445 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.84□□□□□ -0.35
Clrn1Q8K445 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.84□□□□□ -0.35
Clrn1Q8K445 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.84□□□□□ -0.35
Clrn1Q8K445 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.84□□□□□ -0.35
Clrn1Q8K445 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn1Q8K445 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms