Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Grk6-205ENSMUST00000224653 2976 ntBASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cchcr1Q8K2I2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Gm15770-201ENSMUST00000117498 584 ntBASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Gm13453-201ENSMUST00000118708 357 ntBASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cchcr1Q8K2I2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms