Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Gm18766-201ENSMUST00000189811 808 ntBASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Gm5186-201ENSMUST00000218781 920 ntBASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc87Q8CDL9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Gm29541-201ENSMUST00000191351 678 ntBASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc87Q8CDL9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc87Q8CDL9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc87Q8CDL9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc87Q8CDL9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc87Q8CDL9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc87Q8CDL9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.46□□□□□ -0.1
Ccdc87Q8CDL9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc87Q8CDL9 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.46□□□□□ -0.1
Ccdc87Q8CDL9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc87Q8CDL9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Gm13823-201ENSMUST00000119930 345 ntBASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Gm18027-201ENSMUST00000218947 619 ntBASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc87Q8CDL9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms