Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Gm5356-201ENSMUST00000093326 615 ntBASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.83■□□□□ 0.12
Alx1Q8C8B0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Alx1Q8C8B0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Gm8598-201ENSMUST00000221184 836 ntBASIC15.82■□□□□ 0.12
Alx1Q8C8B0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Alx1Q8C8B0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Gm6447-201ENSMUST00000118905 835 ntBASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx1Q8C8B0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx1Q8C8B0 Gm11814-201ENSMUST00000119515 929 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms