Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Gm29608-201ENSMUST00000190444 463 ntBASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Gm5363-201ENSMUST00000211927 938 ntBASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a6Q8C6K9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Gm13123-201ENSMUST00000122173 492 ntBASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Gm6222-202ENSMUST00000182143 629 ntBASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Rps4l-202ENSMUST00000204242 789 ntBASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a6Q8C6K9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Gm6082-201ENSMUST00000215204 454 ntBASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms