Protein–RNA interactions for Protein: Q8C559

Gm9944, MCG148018, mousemouse

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9944Q8C559 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm9944Q8C559 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm9944Q8C559 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm9944Q8C559 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm9944Q8C559 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Gm9944Q8C559 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Gm25990-201ENSMUST00000102440 86 ntBASIC10.2□□□□□ -0.78
Gm9944Q8C559 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.2□□□□□ -0.78
Gm9944Q8C559 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.2□□□□□ -0.78
Gm9944Q8C559 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm9944Q8C559 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Gm11764-201ENSMUST00000120221 623 ntBASIC10.19□□□□□ -0.78
Gm9944Q8C559 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Gm15173-201ENSMUST00000122049 433 ntBASIC10.19□□□□□ -0.78
Gm9944Q8C559 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Rps4l-201ENSMUST00000071745 943 ntBASIC10.19□□□□□ -0.78
Gm9944Q8C559 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm9944Q8C559 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms