Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Gm4271-201ENSMUST00000174444 973 ntBASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Cts7-204ENSMUST00000225321 1257 ntBASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptcd1Q8C2E4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptcd1Q8C2E4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Gm5161-201ENSMUST00000075243 853 ntBASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptcd1Q8C2E4 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.71■□□□□ 0.26
Ptcd1Q8C2E4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Ptcd1Q8C2E4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Ptcd1Q8C2E4 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptcd1Q8C2E4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms