Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Gm6736-201ENSMUST00000166583 948 ntBASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tsen54Q8C2A2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Tsen54Q8C2A2 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.4□□□□□ -0.59
Tsen54Q8C2A2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tsen54Q8C2A2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Tsen54Q8C2A2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tsen54Q8C2A2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tsen54Q8C2A2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Paupar-201ENSMUST00000194826 3482 ntBASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Gm4995-201ENSMUST00000117247 432 ntBASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tsen54Q8C2A2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tsen54Q8C2A2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tsen54Q8C2A2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tsen54Q8C2A2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms