Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm18062-201ENSMUST00000208020 547 ntBASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm18055-201ENSMUST00000208254 547 ntBASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap1Q8BTW8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm11814-201ENSMUST00000119515 929 ntBASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm38144-201ENSMUST00000192790 465 ntBASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm38671-201ENSMUST00000200573 130 ntBASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm18473-201ENSMUST00000220543 868 ntBASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.91□□□□□ -0.34
Cdk5rap1Q8BTW8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cdk5rap1Q8BTW8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cdk5rap1Q8BTW8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap1Q8BTW8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap1Q8BTW8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap1Q8BTW8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms