Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne3Q8BT60 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Gm28630-201ENSMUST00000187806 498 ntBASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne3Q8BT60 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.16□□□□□ -0.3
Cpne3Q8BT60 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Mir497b-201ENSMUST00000093601 125 ntBASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne3Q8BT60 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Gm15460-201ENSMUST00000118147 391 ntBASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Gm12428-201ENSMUST00000119844 727 ntBASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Gm26308-201ENSMUST00000157768 69 ntBASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Gm27622-201ENSMUST00000183779 60 ntBASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms