Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Birc2-201ENSMUST00000054878 378 ntBASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Gm34391-201ENSMUST00000203706 907 ntBASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc5a7Q8BGY9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc5a7Q8BGY9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc5a7Q8BGY9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Slc5a7Q8BGY9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Slc5a7Q8BGY9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc5a7Q8BGY9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc5a7Q8BGY9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms