Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4dQ8BGV9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4dQ8BGV9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4dQ8BGV9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4dQ8BGV9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4dQ8BGV9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4dQ8BGV9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4dQ8BGV9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gm7063-201ENSMUST00000186840 981 ntBASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gm28911-201ENSMUST00000188837 117 ntBASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gm2495-201ENSMUST00000191160 466 ntBASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gm44397-201ENSMUST00000195950 113 ntBASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gm45384-201ENSMUST00000210451 277 ntBASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4dQ8BGV9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Gm9794-201ENSMUST00000202370 423 ntBASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atg4dQ8BGV9 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Gm12490-201ENSMUST00000120255 560 ntBASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms