Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.36□□□□□ -0.27
Ccdc116Q80X53 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc116Q80X53 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc116Q80X53 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc116Q80X53 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc116Q80X53 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Gm27306-201ENSMUST00000183970 107 ntBASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc116Q80X53 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Gm24420-201ENSMUST00000176676 59 ntBASIC13.34□□□□□ -0.27
Ccdc116Q80X53 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc116Q80X53 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc116Q80X53 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc116Q80X53 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.33□□□□□ -0.27
Ccdc116Q80X53 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc116Q80X53 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ccdc116Q80X53 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc116Q80X53 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc116Q80X53 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc116Q80X53 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc116Q80X53 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms