Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim62Q80V85 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim62Q80V85 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim62Q80V85 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim62Q80V85 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim62Q80V85 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim62Q80V85 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim62Q80V85 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim62Q80V85 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim62Q80V85 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim62Q80V85 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.08□□□□□ -0.16
Trim62Q80V85 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim62Q80V85 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Trim62Q80V85 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim62Q80V85 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim62Q80V85 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.07□□□□□ -0.16
Trim62Q80V85 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trim62Q80V85 Gm11918-201ENSMUST00000121660 179 ntBASIC14.07□□□□□ -0.16
Trim62Q80V85 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim62Q80V85 Gm23984-201ENSMUST00000157139 203 ntBASIC14.07□□□□□ -0.16
Trim62Q80V85 Gm44397-201ENSMUST00000195950 113 ntBASIC14.07□□□□□ -0.16
Trim62Q80V85 Gm9794-201ENSMUST00000202370 423 ntBASIC14.07□□□□□ -0.16
Trim62Q80V85 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim62Q80V85 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim62Q80V85 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim62Q80V85 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Trim62Q80V85 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.07□□□□□ -0.16
Trim62Q80V85 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.07□□□□□ -0.16
Trim62Q80V85 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim62Q80V85 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.06□□□□□ -0.16
Trim62Q80V85 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Gm15429-201ENSMUST00000151268 798 ntBASIC14.06□□□□□ -0.16
Trim62Q80V85 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.06□□□□□ -0.16
Trim62Q80V85 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trim62Q80V85 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim62Q80V85 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim62Q80V85 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim62Q80V85 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim62Q80V85 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim62Q80V85 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim62Q80V85 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms