Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Vma21Q78T54 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.09□□□□□ -0.63
Vma21Q78T54 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Vma21Q78T54 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Vma21Q78T54 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Vma21Q78T54 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.08□□□□□ -0.64
Vma21Q78T54 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Vma21Q78T54 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Mir698-201ENSMUST00000102164 109 ntBASIC11.08□□□□□ -0.64
Vma21Q78T54 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.08□□□□□ -0.64
Vma21Q78T54 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.08□□□□□ -0.64
Vma21Q78T54 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.08□□□□□ -0.64
Vma21Q78T54 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.08□□□□□ -0.64
Vma21Q78T54 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.08□□□□□ -0.64
Vma21Q78T54 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.08□□□□□ -0.64
Vma21Q78T54 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.08□□□□□ -0.64
Vma21Q78T54 Gm6916-202ENSMUST00000205523 195 ntBASIC11.08□□□□□ -0.64
Vma21Q78T54 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Vma21Q78T54 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Vma21Q78T54 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.08□□□□□ -0.64
Vma21Q78T54 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.08□□□□□ -0.64
Vma21Q78T54 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Vma21Q78T54 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.08□□□□□ -0.64
Vma21Q78T54 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Vma21Q78T54 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Vma21Q78T54 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.08□□□□□ -0.64
Vma21Q78T54 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.08□□□□□ -0.64
Vma21Q78T54 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vma21Q78T54 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Vma21Q78T54 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Vma21Q78T54 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Vma21Q78T54 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.07□□□□□ -0.64
Vma21Q78T54 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Vma21Q78T54 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.07□□□□□ -0.64
Vma21Q78T54 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Vma21Q78T54 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.07□□□□□ -0.64
Vma21Q78T54 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.07□□□□□ -0.64
Vma21Q78T54 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.07□□□□□ -0.64
Vma21Q78T54 Gm33320-201ENSMUST00000192232 530 ntBASIC11.07□□□□□ -0.64
Vma21Q78T54 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.07□□□□□ -0.64
Vma21Q78T54 Gm44771-201ENSMUST00000206975 626 ntBASIC11.07□□□□□ -0.64
Vma21Q78T54 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Vma21Q78T54 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms