Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Gm5566-201ENSMUST00000116118 459 ntBASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Gm6916-202ENSMUST00000205523 195 ntBASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Mzt1-203ENSMUST00000227948 952 ntBASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scaf4Q6PFF0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Gm9719-201ENSMUST00000162765 543 ntBASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scaf4Q6PFF0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 110.8 ms