Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Gm15770-201ENSMUST00000117498 584 ntBASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Gm5312-201ENSMUST00000203728 547 ntBASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Chchd1-203ENSMUST00000224633 557 ntBASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rad54bQ6PFE3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Gm8410-201ENSMUST00000117225 605 ntBASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Gm24513-201ENSMUST00000174964 138 ntBASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms