Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Gm29541-201ENSMUST00000191351 678 ntBASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.5□□□□□ -0.41
Smarcd3Q6P9Z1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Gm6736-201ENSMUST00000166583 948 ntBASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Gm27702-201ENSMUST00000184512 56 ntBASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Dupd1-202ENSMUST00000224735 548 ntBASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd3Q6P9Z1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms