Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Mir698-201ENSMUST00000102164 109 ntBASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Gm18905-201ENSMUST00000205454 928 ntBASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Casc4Q6P2L7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Casc4Q6P2L7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Gm22189-201ENSMUST00000103822 86 ntBASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Gm7488-201ENSMUST00000117148 684 ntBASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Gm27772-201ENSMUST00000184900 187 ntBASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Casc4Q6P2L7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms