Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slx4Q6P1D7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slx4Q6P1D7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Slx4Q6P1D7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slx4Q6P1D7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slx4Q6P1D7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Gm12539-201ENSMUST00000121549 1098 ntBASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slx4Q6P1D7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Gm5846-201ENSMUST00000193146 1414 ntBASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Gm5597-201ENSMUST00000182353 1193 ntBASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Gm28450-201ENSMUST00000187349 638 ntBASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Gm43399-201ENSMUST00000202546 2374 ntBASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slx4Q6P1D7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Gm19963-201ENSMUST00000208413 1255 ntBASIC20.55■□□□□ 0.88
Slx4Q6P1D7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Gm8228-201ENSMUST00000189949 2192 ntBASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 n-R5s14-201ENSMUST00000122688 107 ntBASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Mir1943-201ENSMUST00000158276 73 ntBASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Gm44262-201ENSMUST00000204969 372 ntBASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slx4Q6P1D7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Gm44775-201ENSMUST00000207266 1456 ntBASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Gm44405-201ENSMUST00000198952 126 ntBASIC20.54■□□□□ 0.88
Slx4Q6P1D7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms