Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ParpbpQ6IRT3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Gm4804-201ENSMUST00000182234 999 ntBASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Gm9522-201ENSMUST00000182394 926 ntBASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ParpbpQ6IRT3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Rubie-203ENSMUST00000227803 2430 ntBASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Gm8927-201ENSMUST00000181978 981 ntBASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Gm10766-202ENSMUST00000194123 606 ntBASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Gm20445-201ENSMUST00000061905 565 ntBASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Gm3222-201ENSMUST00000071282 990 ntBASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms