Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mre11Q61216 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mre11Q61216 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mre11Q61216 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mre11Q61216 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mre11Q61216 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Mre11Q61216 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mre11Q61216 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.31■□□□□ 0.2
Mre11Q61216 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.31■□□□□ 0.2
Mre11Q61216 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.31■□□□□ 0.2
Mre11Q61216 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Mre11Q61216 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Mre11Q61216 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.31■□□□□ 0.2
Mre11Q61216 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.31■□□□□ 0.2
Mre11Q61216 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.31■□□□□ 0.2
Mre11Q61216 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.31■□□□□ 0.2
Mre11Q61216 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC16.31■□□□□ 0.2
Mre11Q61216 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mre11Q61216 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Mre11Q61216 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Mre11Q61216 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Mre11Q61216 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Gm7461-201ENSMUST00000058918 827 ntBASIC16.3■□□□□ 0.2
Mre11Q61216 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Mre11Q61216 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Paupar-201ENSMUST00000194826 3482 ntBASIC16.3■□□□□ 0.2
Mre11Q61216 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.3■□□□□ 0.2
Mre11Q61216 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mre11Q61216 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.29■□□□□ 0.2
Mre11Q61216 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.29■□□□□ 0.2
Mre11Q61216 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Mre11Q61216 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Mre11Q61216 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Mre11Q61216 Gm5422-201ENSMUST00000050717 2721 ntBASIC16.29■□□□□ 0.2
Mre11Q61216 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Mre11Q61216 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.29■□□□□ 0.2
Mre11Q61216 Gm5864-201ENSMUST00000202263 970 ntBASIC16.29■□□□□ 0.2
Mre11Q61216 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.29■□□□□ 0.2
Mre11Q61216 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Mre11Q61216 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Mre11Q61216 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Mre11Q61216 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mre11Q61216 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mre11Q61216 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Mre11Q61216 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mre11Q61216 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mre11Q61216 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mre11Q61216 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mre11Q61216 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mre11Q61216 Gm11452-201ENSMUST00000122376 690 ntBASIC16.28■□□□□ 0.2
Mre11Q61216 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mre11Q61216 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC16.28■□□□□ 0.2
Mre11Q61216 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mre11Q61216 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms