Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.25□□□□□ -0.13
Traf3Q60803 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Traf3Q60803 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.24□□□□□ -0.13
Traf3Q60803 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Traf3Q60803 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Gm13689-201ENSMUST00000119360 685 ntBASIC14.24□□□□□ -0.13
Traf3Q60803 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Traf3Q60803 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.24□□□□□ -0.13
Traf3Q60803 Gm23984-201ENSMUST00000157139 203 ntBASIC14.24□□□□□ -0.13
Traf3Q60803 Gm18018-201ENSMUST00000198273 408 ntBASIC14.24□□□□□ -0.13
Traf3Q60803 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.24□□□□□ -0.13
Traf3Q60803 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Traf3Q60803 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.24□□□□□ -0.13
Traf3Q60803 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.24□□□□□ -0.13
Traf3Q60803 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Traf3Q60803 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Traf3Q60803 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Traf3Q60803 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Traf3Q60803 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
Traf3Q60803 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Traf3Q60803 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Traf3Q60803 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.23□□□□□ -0.13
Traf3Q60803 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.23□□□□□ -0.13
Traf3Q60803 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.23□□□□□ -0.13
Traf3Q60803 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Traf3Q60803 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.23□□□□□ -0.13
Traf3Q60803 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.23□□□□□ -0.13
Traf3Q60803 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Traf3Q60803 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Traf3Q60803 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.23□□□□□ -0.13
Traf3Q60803 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Traf3Q60803 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Traf3Q60803 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Traf3Q60803 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Traf3Q60803 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.22□□□□□ -0.13
Traf3Q60803 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Traf3Q60803 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Traf3Q60803 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms