Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ClpbQ60649 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ClpbQ60649 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
ClpbQ60649 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
ClpbQ60649 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
ClpbQ60649 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.08□□□□□ -0.32
ClpbQ60649 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ClpbQ60649 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.08□□□□□ -0.32
ClpbQ60649 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.08□□□□□ -0.32
ClpbQ60649 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Gm21854-201ENSMUST00000179901 471 ntBASIC13.08□□□□□ -0.32
ClpbQ60649 Gm28760-201ENSMUST00000185995 736 ntBASIC13.08□□□□□ -0.32
ClpbQ60649 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.08□□□□□ -0.32
ClpbQ60649 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.08□□□□□ -0.32
ClpbQ60649 Gm10766-202ENSMUST00000194123 606 ntBASIC13.08□□□□□ -0.32
ClpbQ60649 Gm5186-201ENSMUST00000218781 920 ntBASIC13.08□□□□□ -0.32
ClpbQ60649 Grk6-205ENSMUST00000224653 2976 ntBASIC13.08□□□□□ -0.32
ClpbQ60649 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.08□□□□□ -0.32
ClpbQ60649 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ClpbQ60649 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.08□□□□□ -0.32
ClpbQ60649 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.08□□□□□ -0.32
ClpbQ60649 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ClpbQ60649 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.08□□□□□ -0.32
ClpbQ60649 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ClpbQ60649 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
ClpbQ60649 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.08□□□□□ -0.32
ClpbQ60649 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClpbQ60649 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
ClpbQ60649 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ClpbQ60649 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.07□□□□□ -0.32
ClpbQ60649 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.07□□□□□ -0.32
ClpbQ60649 Gm22189-201ENSMUST00000103822 86 ntBASIC13.07□□□□□ -0.32
ClpbQ60649 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.07□□□□□ -0.32
ClpbQ60649 Gm12859-201ENSMUST00000117834 427 ntBASIC13.07□□□□□ -0.32
ClpbQ60649 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.07□□□□□ -0.32
ClpbQ60649 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.07□□□□□ -0.32
ClpbQ60649 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.07□□□□□ -0.32
ClpbQ60649 Gm42612-201ENSMUST00000197986 623 ntBASIC13.07□□□□□ -0.32
ClpbQ60649 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Gm43170-201ENSMUST00000199827 612 ntBASIC13.07□□□□□ -0.32
ClpbQ60649 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ClpbQ60649 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ClpbQ60649 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.07□□□□□ -0.32
ClpbQ60649 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
ClpbQ60649 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.07□□□□□ -0.32
ClpbQ60649 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ClpbQ60649 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ClpbQ60649 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ClpbQ60649 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ClpbQ60649 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClpbQ60649 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms