Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim38Q5SZ99 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Trim38Q5SZ99 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Matn2-206ENSMUST00000228570 2798 ntBASIC14.12□□□□□ -0.15
Trim38Q5SZ99 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim38Q5SZ99 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms