Protein–RNA interactions for Protein: Q52KE7

Ccnl1, Cyclin-L1, mousemouse

Known RBP Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnl1Q52KE7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Gm20482-202ENSMUST00000174729 825 ntBASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Mir7070-201ENSMUST00000183657 86 ntBASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccnl1Q52KE7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Gm12363-201ENSMUST00000122250 668 ntBASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Gm2383-201ENSMUST00000181461 807 ntBASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccnl1Q52KE7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccnl1Q52KE7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccnl1Q52KE7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccnl1Q52KE7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Gm21769-201ENSMUST00000211922 111 ntBASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Gm19163-201ENSMUST00000223313 780 ntBASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccnl1Q52KE7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Gm12997-201ENSMUST00000120207 640 ntBASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Mir3547-201ENSMUST00000175461 88 ntBASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Gm3786-201ENSMUST00000202659 378 ntBASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccnl1Q52KE7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccnl1Q52KE7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms