Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Gm29741-201ENSMUST00000192667 421 ntBASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Gm42627-201ENSMUST00000197347 224 ntBASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Cts7-204ENSMUST00000225321 1257 ntBASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx49Q4FZF3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Gm15808-201ENSMUST00000119046 604 ntBASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Gm11793-201ENSMUST00000120433 981 ntBASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Gm16570-201ENSMUST00000161951 436 ntBASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Gm26461-201ENSMUST00000175064 290 ntBASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Gm43133-201ENSMUST00000197472 463 ntBASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx49Q4FZF3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Gm29199-201ENSMUST00000187766 775 ntBASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Gm18935-201ENSMUST00000212692 664 ntBASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Snora73a-201ENSMUST00000082453 205 ntBASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Gm10268-201ENSMUST00000085340 555 ntBASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ddx49Q4FZF3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms