Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Gm25287-201ENSMUST00000103846 110 ntBASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Gm22918-201ENSMUST00000103855 110 ntBASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Gm44335-201ENSMUST00000196879 141 ntBASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Gm44297-201ENSMUST00000198304 141 ntBASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Gm44346-201ENSMUST00000198851 141 ntBASIC14.45□□□□□ -0.1
Trim43aQ3TL54 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Mir497b-201ENSMUST00000093601 125 ntBASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43aQ3TL54 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.44□□□□□ -0.1
Trim43aQ3TL54 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.44□□□□□ -0.1
Trim43aQ3TL54 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Mir698-201ENSMUST00000102164 109 ntBASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms