Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cul4aQ3TCH7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Gm43703-201ENSMUST00000200523 763 ntBASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cul4aQ3TCH7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Gm8410-201ENSMUST00000117225 605 ntBASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Gm15240-201ENSMUST00000118156 720 ntBASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Gm14822-201ENSMUST00000122247 291 ntBASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Gm27397-201ENSMUST00000184997 107 ntBASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Gm5425-201ENSMUST00000214125 459 ntBASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms