Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccbe1Q3MI99 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Gm7506-201ENSMUST00000207758 815 ntBASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Gm6296-201ENSMUST00000222599 943 ntBASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccbe1Q3MI99 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Gm6376-201ENSMUST00000209407 580 ntBASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms