Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.06□□□□□ -0.48
Chd8Q09XV5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd8Q09XV5 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.05□□□□□ -0.48
Chd8Q09XV5 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.05□□□□□ -0.48
Chd8Q09XV5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Gm10312-201ENSMUST00000078515 489 ntBASIC12.05□□□□□ -0.48
Chd8Q09XV5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd8Q09XV5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.04□□□□□ -0.48
Chd8Q09XV5 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.04□□□□□ -0.48
Chd8Q09XV5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.04□□□□□ -0.48
Chd8Q09XV5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Mir7076-201ENSMUST00000183519 74 ntBASIC12.04□□□□□ -0.48
Chd8Q09XV5 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms