Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.8□□□□□ -0.2
Ebf1Q07802 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.8□□□□□ -0.2
Ebf1Q07802 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ebf1Q07802 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ebf1Q07802 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Gm15198-201ENSMUST00000117283 177 ntBASIC13.79□□□□□ -0.2
Ebf1Q07802 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.79□□□□□ -0.2
Ebf1Q07802 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Gm24196-201ENSMUST00000179161 110 ntBASIC13.79□□□□□ -0.2
Ebf1Q07802 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.79□□□□□ -0.2
Ebf1Q07802 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.79□□□□□ -0.2
Ebf1Q07802 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.79□□□□□ -0.2
Ebf1Q07802 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.79□□□□□ -0.2
Ebf1Q07802 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.79□□□□□ -0.2
Ebf1Q07802 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.79□□□□□ -0.2
Ebf1Q07802 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ebf1Q07802 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ebf1Q07802 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ebf1Q07802 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.78□□□□□ -0.2
Ebf1Q07802 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ebf1Q07802 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Ebf1Q07802 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Gm12384-201ENSMUST00000119228 919 ntBASIC13.78□□□□□ -0.2
Ebf1Q07802 Gm13612-201ENSMUST00000119276 390 ntBASIC13.78□□□□□ -0.2
Ebf1Q07802 Gm13689-201ENSMUST00000119360 685 ntBASIC13.78□□□□□ -0.2
Ebf1Q07802 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.78□□□□□ -0.2
Ebf1Q07802 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.78□□□□□ -0.2
Ebf1Q07802 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.78□□□□□ -0.2
Ebf1Q07802 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.78□□□□□ -0.2
Ebf1Q07802 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.78□□□□□ -0.2
Ebf1Q07802 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms