Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sox4Q06831 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.38□□□□□ -0.27
Sox4Q06831 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sox4Q06831 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Gm13689-201ENSMUST00000119360 685 ntBASIC13.38□□□□□ -0.27
Sox4Q06831 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.38□□□□□ -0.27
Sox4Q06831 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox4Q06831 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox4Q06831 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox4Q06831 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.38□□□□□ -0.27
Sox4Q06831 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox4Q06831 Gm5161-201ENSMUST00000075243 853 ntBASIC13.38□□□□□ -0.27
Sox4Q06831 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.38□□□□□ -0.27
Sox4Q06831 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
Sox4Q06831 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sox4Q06831 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sox4Q06831 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sox4Q06831 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox4Q06831 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox4Q06831 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.37□□□□□ -0.27
Sox4Q06831 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox4Q06831 Gm11918-201ENSMUST00000121660 179 ntBASIC13.37□□□□□ -0.27
Sox4Q06831 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
Sox4Q06831 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox4Q06831 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.37□□□□□ -0.27
Sox4Q06831 Gm24447-201ENSMUST00000083977 338 ntBASIC13.37□□□□□ -0.27
Sox4Q06831 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sox4Q06831 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.37□□□□□ -0.27
Sox4Q06831 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.37□□□□□ -0.27
Sox4Q06831 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox4Q06831 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sox4Q06831 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sox4Q06831 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.36□□□□□ -0.27
Sox4Q06831 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.36□□□□□ -0.27
Sox4Q06831 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox4Q06831 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox4Q06831 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox4Q06831 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox4Q06831 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms