Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.91■□□□□ 0.3
Col1a2Q01149 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.9■□□□□ 0.3
Col1a2Q01149 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.9■□□□□ 0.3
Col1a2Q01149 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.9■□□□□ 0.3
Col1a2Q01149 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.9■□□□□ 0.3
Col1a2Q01149 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.9■□□□□ 0.3
Col1a2Q01149 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col1a2Q01149 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Col1a2Q01149 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.9■□□□□ 0.3
Col1a2Q01149 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.9■□□□□ 0.3
Col1a2Q01149 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.9■□□□□ 0.3
Col1a2Q01149 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.9■□□□□ 0.3
Col1a2Q01149 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Col1a2Q01149 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.9■□□□□ 0.3
Col1a2Q01149 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.9■□□□□ 0.3
Col1a2Q01149 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col1a2Q01149 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.89■□□□□ 0.3
Col1a2Q01149 Gm25927-201ENSMUST00000175058 117 ntBASIC16.89■□□□□ 0.3
Col1a2Q01149 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.89■□□□□ 0.3
Col1a2Q01149 Gm28693-202ENSMUST00000190758 331 ntBASIC16.89■□□□□ 0.3
Col1a2Q01149 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.89■□□□□ 0.3
Col1a2Q01149 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Col1a2Q01149 AC133598.1-201ENSMUST00000224327 660 ntBASIC16.89■□□□□ 0.3
Col1a2Q01149 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col1a2Q01149 Gm7399-201ENSMUST00000032395 858 ntBASIC16.89■□□□□ 0.3
Col1a2Q01149 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col1a2Q01149 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.89■□□□□ 0.29
Col1a2Q01149 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.89■□□□□ 0.29
Col1a2Q01149 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col1a2Q01149 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.89■□□□□ 0.29
Col1a2Q01149 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.89■□□□□ 0.29
Col1a2Q01149 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Col1a2Q01149 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col1a2Q01149 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Col1a2Q01149 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Col1a2Q01149 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.89■□□□□ 0.29
Col1a2Q01149 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.89■□□□□ 0.29
Col1a2Q01149 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.89■□□□□ 0.29
Col1a2Q01149 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.89■□□□□ 0.29
Col1a2Q01149 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col1a2Q01149 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms