Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn1bP97952 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Scn1bP97952 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.43□□□□□ -0.42
Scn1bP97952 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.43□□□□□ -0.42
Scn1bP97952 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Mir5126-201ENSMUST00000175513 77 ntBASIC12.43□□□□□ -0.42
Scn1bP97952 Gm2445-201ENSMUST00000182798 989 ntBASIC12.43□□□□□ -0.42
Scn1bP97952 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.43□□□□□ -0.42
Scn1bP97952 Gm37230-201ENSMUST00000194491 818 ntBASIC12.43□□□□□ -0.42
Scn1bP97952 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Scn1bP97952 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.43□□□□□ -0.42
Scn1bP97952 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn1bP97952 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Scn1bP97952 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.42□□□□□ -0.42
Scn1bP97952 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn1bP97952 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.42□□□□□ -0.42
Scn1bP97952 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.42□□□□□ -0.42
Scn1bP97952 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.42□□□□□ -0.42
Scn1bP97952 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Scn1bP97952 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.42□□□□□ -0.42
Scn1bP97952 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.42□□□□□ -0.42
Scn1bP97952 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.42□□□□□ -0.42
Scn1bP97952 Mzt1-203ENSMUST00000227948 952 ntBASIC12.42□□□□□ -0.42
Scn1bP97952 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Scn1bP97952 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scn1bP97952 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Scn1bP97952 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1bP97952 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn1bP97952 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.41□□□□□ -0.42
Scn1bP97952 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Scn1bP97952 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Scn1bP97952 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn1bP97952 Gm10275-202ENSMUST00000168697 495 ntBASIC12.41□□□□□ -0.42
Scn1bP97952 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.41□□□□□ -0.42
Scn1bP97952 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn1bP97952 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn1bP97952 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.41□□□□□ -0.42
Scn1bP97952 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.41□□□□□ -0.42
Scn1bP97952 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Gm7461-201ENSMUST00000058918 827 ntBASIC12.41□□□□□ -0.42
Scn1bP97952 Gm10275-201ENSMUST00000092620 635 ntBASIC12.41□□□□□ -0.42
Scn1bP97952 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Scn1bP97952 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Scn1bP97952 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms