Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smn1P97801 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Smn1P97801 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.67□□□□□ -0.54
Smn1P97801 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smn1P97801 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Smn1P97801 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.66□□□□□ -0.54
Smn1P97801 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.66□□□□□ -0.54
Smn1P97801 Mir8117-201ENSMUST00000184773 107 ntBASIC11.66□□□□□ -0.54
Smn1P97801 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.66□□□□□ -0.54
Smn1P97801 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.66□□□□□ -0.54
Smn1P97801 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.66□□□□□ -0.54
Smn1P97801 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.66□□□□□ -0.54
Smn1P97801 Gm45453-201ENSMUST00000211758 853 ntBASIC11.66□□□□□ -0.54
Smn1P97801 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Mir125a-201ENSMUST00000083545 68 ntBASIC11.66□□□□□ -0.54
Smn1P97801 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.66□□□□□ -0.54
Smn1P97801 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.66□□□□□ -0.54
Smn1P97801 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smn1P97801 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smn1P97801 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.65□□□□□ -0.54
Smn1P97801 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.65□□□□□ -0.54
Smn1P97801 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.65□□□□□ -0.54
Smn1P97801 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.65□□□□□ -0.54
Smn1P97801 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.65□□□□□ -0.54
Smn1P97801 Gm27631-201ENSMUST00000184163 466 ntBASIC11.65□□□□□ -0.54
Smn1P97801 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.65□□□□□ -0.54
Smn1P97801 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.65□□□□□ -0.54
Smn1P97801 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.65□□□□□ -0.54
Smn1P97801 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smn1P97801 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smn1P97801 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smn1P97801 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smn1P97801 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smn1P97801 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smn1P97801 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Smn1P97801 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smn1P97801 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smn1P97801 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smn1P97801 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smn1P97801 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.64□□□□□ -0.55
Smn1P97801 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.64□□□□□ -0.55
Smn1P97801 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.64□□□□□ -0.55
Smn1P97801 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smn1P97801 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smn1P97801 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smn1P97801 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smn1P97801 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smn1P97801 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smn1P97801 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smn1P97801 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms