Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Nkx3-2P97503 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Gm18307-201ENSMUST00000206864 949 ntBASIC12.89□□□□□ -0.35
Nkx3-2P97503 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.89□□□□□ -0.35
Nkx3-2P97503 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.89□□□□□ -0.35
Nkx3-2P97503 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.89□□□□□ -0.35
Nkx3-2P97503 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.89□□□□□ -0.35
Nkx3-2P97503 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-2P97503 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Gm28911-201ENSMUST00000188837 117 ntBASIC12.88□□□□□ -0.35
Nkx3-2P97503 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Gm19078-201ENSMUST00000206311 727 ntBASIC12.88□□□□□ -0.35
Nkx3-2P97503 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.88□□□□□ -0.35
Nkx3-2P97503 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.88□□□□□ -0.35
Nkx3-2P97503 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.88□□□□□ -0.35
Nkx3-2P97503 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.88□□□□□ -0.35
Nkx3-2P97503 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.88□□□□□ -0.35
Nkx3-2P97503 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-2P97503 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gm8927-201ENSMUST00000181978 981 ntBASIC12.87□□□□□ -0.35
Nkx3-2P97503 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.87□□□□□ -0.35
Nkx3-2P97503 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gm3222-201ENSMUST00000071282 990 ntBASIC12.87□□□□□ -0.35
Nkx3-2P97503 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms