Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lig3P97386 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Lig3P97386 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Lig3P97386 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.9□□□□□ -0.02
Lig3P97386 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.9□□□□□ -0.02
Lig3P97386 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.9□□□□□ -0.02
Lig3P97386 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Lig3P97386 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.9□□□□□ -0.02
Lig3P97386 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Gm5356-201ENSMUST00000093326 615 ntBASIC14.9□□□□□ -0.02
Lig3P97386 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Lig3P97386 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Lig3P97386 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.9□□□□□ -0.02
Lig3P97386 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.9□□□□□ -0.02
Lig3P97386 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lig3P97386 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Lig3P97386 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Lig3P97386 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Gm15678-201ENSMUST00000117573 960 ntBASIC14.89□□□□□ -0.03
Lig3P97386 Gm13392-201ENSMUST00000117708 150 ntBASIC14.89□□□□□ -0.03
Lig3P97386 Gm12390-201ENSMUST00000117897 397 ntBASIC14.89□□□□□ -0.03
Lig3P97386 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.89□□□□□ -0.03
Lig3P97386 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.89□□□□□ -0.03
Lig3P97386 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.89□□□□□ -0.03
Lig3P97386 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Lig3P97386 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.89□□□□□ -0.03
Lig3P97386 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Lig3P97386 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.89□□□□□ -0.03
Lig3P97386 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lig3P97386 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.88□□□□□ -0.03
Lig3P97386 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.88□□□□□ -0.03
Lig3P97386 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.88□□□□□ -0.03
Lig3P97386 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.88□□□□□ -0.03
Lig3P97386 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.88□□□□□ -0.03
Lig3P97386 Gm5354-201ENSMUST00000182417 973 ntBASIC14.88□□□□□ -0.03
Lig3P97386 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Gm45098-201ENSMUST00000207179 657 ntBASIC14.88□□□□□ -0.03
Lig3P97386 Gm9257-201ENSMUST00000221254 232 ntBASIC14.88□□□□□ -0.03
Lig3P97386 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.88□□□□□ -0.03
Lig3P97386 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Lig3P97386 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.88□□□□□ -0.03
Lig3P97386 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lig3P97386 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Lig3P97386 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lig3P97386 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms